hpo — Neurospora crassa

Summary

NCU04017 (hpo, also known as NcSWI6) on Neurospora crassa chromosome 6 encodes HP1, a heterochromatin protein with a chromo domain and chromo shadow domain that has histone H3K9me2/3 reader activity and chromatin adaptor activity, and binds chromatin, DNA, RNA, and identical proteins. The gene is associated with diverse chromatin-related processes including centromeric silencing, telomeric silencing, rDNA heterochromatin assembly, heterochromatin boundary formation, RNAi-mediated heterochromatin assembly at centromeres, siRNA-mediated silent mating-type cassette region heterochromatin formation, mating-type switching, donor selection, gene conversion at the mating-type locus, mitotic sister chromatid biorientation, anaphase cohesion protection, and centromeric mitotic sister chromatin cohesion. The HP1 protein localizes to heterochromatin islands, subtelomeric heterochromatin, centric heterochromatin, the mating-type region heterochromatin, and condensed chromosome centric regions. Related genes in other species are linked to turgor pressure and oxidative stress response.

Annotations

Chromosome
6
Related genes
HPO
GO terms
RNAi-like chromatin silencing, RNA Binding, Nucleus, DNA Binding, DNA-dependent transcription, Chromatin, Mating-type Region Heterochromatin, Methylation
Publications
PMID:17601879, PMID:23485399, PMID:23994322, PMID:22321443, PMID:15317867, PMID:8138176, PMID:11283354, PMID:10835380
Traits
oxidative stress response, turgor pressure