PNH — Lactuca sativa
Summary
LsPNH, located on chromosome 8 of garden lettuce (Lactuca sativa), encodes a protein with Argonaute, Piwi, and PAZ domains, and is annotated with RNA endonuclease, siRNA binding, and dsRNA binding activities, as well as histone ubiquitin ligase and deubiquitinase activities. The gene is associated with miRNA and siRNA metabolic processes, gene silencing, and the regulation of development, including somatic stem cell population maintenance and cell fate commitment. It has been linked to numerous traits such as leaf morphology, polarity, and shattering, flower and inflorescence development, root phototropism, UV light sensitivity, photosynthetic ability, and metabolite content. Associations with seed dormancy, longevity, germination time, and auxin signalling have also been noted. Studies of related genes in other species connect the family to leaf shape, viral resistance, reproductive development, and heat tolerance.
Annotations
- Chromosome
- 8
- Related genes
- PNH, AtC3H6, FSD1, AGO5, DRB1, CS1, CFH1, AT1G01183
- GO terms
- gibberellin-mediated signalling, Plasmodesma, Protein Monoubiquitination, cellular response to Ca2+ ion, salinity response, Ta-siRNA Processing, D body, Response To Ozone
- Publications
- 21295131, 28900084, 31794029, 30760482, 36743500, 25320212, 23448691, 25409478
- Traits
- seed germination, intron splicing, plant immunity, thermotolerance, oxidative stress tolerance, redox homeostasis, miRNA processing, RNA silencing