ARF — Nicotiana attenuata

Summary

A4A49_55922 (ARF) in coyote tobacco (Nicotiana attenuata) encodes a small GTPase of the Arf1-5-like family, with annotated molecular functions including G protein activity, phosphatidylinositol kinase activity, phospholipase activator activity, and actin binding. The gene is associated with vesicle-mediated transport to the plasma membrane, ER-to-Golgi transport, Golgi organization, and protein retention in the ER lumen. It is linked to nicotine and alkaloid anabolism, anthocyanin anabolism, regulation of auxin metabolism, and blue light signaling. Associations with traits include biomass yield, water use efficiency, days to flowering, leaf senescence, stomatal resistance, root mass density, lateral root length, and responses to low temperature, oxidative stress, ethylene, and abscisic acid. The gene is also linked to phototropism, chloroplast accumulation movement, and viral disease response.

Annotations

Chromosome
scaffold00354
Related genes
ARF, AT1G21900, PIP5K1, ARFB1A, LOV2, VH1, ARFA1F, ARF1
GO terms
GO:0005046, homeostasis, Plasmodesma, GO:0009638, Blue Light Signaling Pathway, Acyltransferase Activity, Transferring Groups Other Than Amino-acyl Groups, Lateral Root Formation, Protein Retention In ER Lumen
Publications
22773817, 23931732, 33264621, 28871045, 35326389, 19166492, 21406621, 32487565
Traits
leaf hydraulic conductance, plant growth, phototropism, adventitious root formation, light response, chloroplast accumulation, chloroplast avoidance, phototropic growth