HD1 — Sorghum bicolor

Summary

SbHD1 (SORBI_3005G079400) on sorghum chromosome 5 encodes a protein with histone deacetylase activity, NAD-independent, and is a member of the His_deacetylse family. It is also annotated with histone demethylase, methyltransferase, transcription corepressor, and chromatin-binding activities. In sorghum, SbHD1 is associated with abiotic stress tolerance. The gene is linked to negative regulation of seed maturation, fruit abscission, regulation of multicellular organismal development, and cellular response to external biotic stimulus. It localizes to the HDAC complex, PRC2 complex, condensed chromosome, nucleolus, and chloroplast envelope. Associations include traits such as drought and salinity tolerance, floral organ length, fruit ripening, branch angle, leaf elongation rate, total soluble sugar content, and vegetative to reproductive phase transition. Studies of related genes in other species link the family to salt tolerance, brassinosteroid signaling, root development, and flower development.

Annotations

Chromosome
5
Related genes
HD1, SCL1, LUG, HIS4, HDA17, HDA9, TPL, AT3G44690
GO terms
Leaf Development, PTGS, Regulation Of Timing Of Transition From Vegetative To Reproductive Phase, downregulation of seed germination, Leaf Morphogenesis, Pollen Development, regulation of ROS metabolic process, Protein Ubiquitination
Publications
40153710, 37552957, 20387035, 20226671, 21963667, 22476455, 29619039, 30225301
Traits
female germline specification, lateral root branching angle, jasmonate response, herbivore defense, defense response, resistance to Botrytis cinerea, stomatal closure, lignin biosynthesis