AMY1 — Hordeum vulgare subsp. vulgare

Summary

HORVU.MOREX.R3.6HG0617490 (HvAMY1) on barley chromosome 6H encodes a 1,4-alpha-D-glucan glucanohydrolase, a member of the glycoside hydrolase family 13 with a Glyco_hydro_13_cat_dom domain. The gene is associated with seed germination, endosperm development, embryo development ending in seed dormancy, and responses to gibberellin and abscisic acid. It is linked to sucrose breakdown, sumoylation, and structural organization. The encoded protein localizes to the apoplast, chloroplast stroma, cytosol, and nucleus. HvAMY1 is associated with grain filling period, reproductive period, seed size, flowering time, and abscisic acid sensitivity. It has been connected to grain chalkiness, starch degradation, stomatal opening, osmotic stress tolerance, and heat stress response. Studies of related genes in other species link the family to transitory starch breakdown and osmotic stress response, and to submergence and drought stress responses, seed starch content, and alpha-amylase activity.

Annotations

Chromosome
6H
Related genes
AMY1, AMY1.1, SUM3, AMY1.3, SCE1, AMYC2, AMY2, AMY1.2
GO terms
structural organization, Response To Gibberellin, SUMO Binding, carbohydrate metabolism, Embryo Development Ending In Seed Dormancy, Cytosol, Alpha-amylase Activity, protein tag
Publications
27129483, 15749471, 23909862, 20074036, 22330895, 17764576, 23393426, 16367961
Traits
starch degradation, Increased Starch Content After Cold Shock, Alpha-Amylase Deficient, aLRLpMRL125, rFitness mlp, abscisic acid response, starch breakdown, transitory starch breakdown