FG — Solanum tuberosum

Summary

StFG (PGSC0003DMG400042340) on potato chromosome 12 encodes a CONSTANS-like protein with a CCT domain and is annotated with diverse molecular functions including OGTase, peptide-O-fucosyltransferase, protein N-GlcNAc transferase, glutamate-tRNA ligase, histone methylase, and red/far-red light photoreceptor activities. The gene is associated with regulation of phytochrome signaling, zeatin and trans-zeatin anabolism, chlorophyll breakdown upregulation, short-day photoperiodism and flowering, flower formation, response to long and short days, and ascorbate biosynthesis regulation. It localizes to the CCAAT-binding factor complex, COP9 signalosome, nuclear ubiquitin ligase complex, and other nuclear bodies. Associations include traits such as photoperiod sensitivity, tuber size, vegetative vigor, leaf morphology, seed protein content, and responses to water stress, nitrogen, nitrate, and glyphosate. Related genes in other species link the CONSTANS-like family to photoperiod-dependent flowering time, tuberization, heat stress tolerance, and disease resistance.

Annotations

Chromosome
12
Related genes
CO, SPA1, TOE1, BBX2, HRB1, DET1, BOI, COP1
GO terms
zeatin anabolism, NO storage, histone H3K36 methylase activity, positive regulation of protein breakdown, Regulation Of Circadian Rhythm, response to long-day, flowering, histone H3K4 methylase activity, downregulation of programmed cell death
Publications
23107921, 23144785, 26073981, 20387035, 10985392, 26358558, 27444995, 32248530
Traits
flowering time, nitrate-responsive gene expression, nitrate response, lateral root growth, pavement cell shape, pavement cell interdigitation, thermotolerance, seed germination