FG — Solanum tuberosum

Summary

StFG (PGSC0003DMG400006387) on potato chromosome 4 encodes a CONSTANS-like protein with a CCT domain and has been annotated with numerous molecular functions including OGTase, peptide-O-fucosyltransferase, glutamate-tRNA ligase, histone methylase, and red/far-red light photoreceptor activities. The gene is associated with regulation of the phytochrome signaling pathway, zeatin and trans-zeatin anabolism, upregulation of chlorophyll breakdown and short-day photoperiodic flowering, flower formation, response to long-day and short-day conditions, and negative regulation of cellulose anabolism. It has been linked to traits including subterranean shoot axis tuber size, photoperiod sensitivity, water stress response, vegetative vigor, iron content, leaf angle, and sensitivities to red, far-red, UV light, nitrogen, nitrate, and glyphosate. Related genes in other species link the family to longer hypocotyls, early flowering, reduced lateral roots, and stress response.

Annotations

Chromosome
4
Related genes
CO, SPA1, TOE1, BBX2, HRB1, DET1, BOI, COP1
GO terms
zeatin anabolism, NO storage, histone H3K36 methylase activity, positive regulation of protein breakdown, Regulation Of Circadian Rhythm, response to long-day, flowering, histone H3K4 methylase activity, downregulation of programmed cell death
Publications
23107921, 23144785, 26073981, 20387035, 10985392, 26358558, 27444995, 32248530
Traits
flowering time, nitrate-responsive gene expression, nitrate response, lateral root growth, pavement cell shape, pavement cell interdigitation, thermotolerance, seed germination