APX — Daucus carota subsp. sativus

Summary

DCAR_018843 (DcAPX) on carrot chromosome 5 encodes a haem peroxidase with L-ascorbate peroxidase activity, also annotated with p-coumarate 3-hydroxylase, siRNA binding, chitosan binding, RNA endonuclease, miRNA binding, chitin binding, histone H2AS1 kinase, transmembrane receptor protein kinase, heme binding, kinase, protein kinase, protein serine/threonine kinase, and metal binding activities. The gene is associated with cellular response to oxidative stress, hydrogen peroxide catabolism, auxin metabolism, lignin anabolism, cell cycle G2/M phase transition, positive regulation of stomatal complex development, leaf patterning, adventitious root development, and gene silencing by miRNA. It localises to peroxisome membrane, chloroplast thylakoid membrane, stress granule, plant-type cell wall, Golgi, plasmodesma, mitochondria, and extracellular regions. DcAPX is linked to bacterial blight disease resistance, viral disease response, aphid response, biomass yield, seed viability, days to flowering, photosynthetic rate, leaf senescence, root length, and ethylene sensitivity. Related genes in other species are associated with drought, heat, salt, oxidative stress tolerance, and pathogen defense.

Annotations

Chromosome
5
Related genes
CS1, APX, LYK1, AGO1, CS2, CYCA2-3
GO terms
positive regulation of HR, Plasmodesma, DNA re-duplication, auxin metabolism, Lateral Root Formation, Adaxial/abaxial Pattern Specification, Leaf Morphogenesis, Transmembrane Receptor Protein Kinase Activity
Publications
21295131, 28900084, 36743500, 25320212, 23448691, 36398896, 23313553, 21467580
Traits
intron splicing, plant immunity, heat stress memory, RNA silencing, plant morphology, fungal disease resistance, disease resistance, stomatal development