CHS — Daucus carota subsp. sativus

Summary

DCAR_018997 (DcCHS) on carrot chromosome 5 encodes a type III polyketide synthase with chalcone/stilbene synthase domains, annotated with naringenin-chalcone synthase, chalcone isomerase, flavanone 4-reductase, dihydroflavanol 4-reductase, flavonol synthase, tetraketide alpha-pyrone synthase, acyltransferase and SUMO transferase activities. The gene is associated with chalcone, polyketide, flavonoid, anthocyanin and flavonol biosynthesis, pollen wall assembly, regulation of phenylpropanoid and anthocyanin metabolism, sumoylation, translation elongation, and responses to UV, UV-B, jasmonic acid, gravity, heat acclimation and auxin polar transport. It is linked to anthocyanin content, flavonoid content, UV light sensitivity, photosynthetic rate, respiration rate, flowering time, root morphology, stamen morphology, root phototropism, stomatal opening, oxidative stress response, salt stress tolerance, drought tolerance, nitrogen stress tolerance, male sterility, pollen exine development, root-knot nematode resistance and genome stability. The protein localises to the cytosol, nucleus, endoplasmic reticulum and tonoplast.

Annotations

Chromosome
5
Related genes
CHS, SUM3, LAP5, DFR, SUM1, KMD3, FLS, SCE1
GO terms
Chalcone Isomerase Activity, translation elongation, Acyltransferase Activity, Transferring Groups Other Than Amino-acyl Groups, regulation of phenylpropanoid metabolism, Pollen Exine Formation, Flavonol Synthase Activity, flavonoid anabolism, Naringenin-chalcone Synthase Activity
Publications
29282604, 27129483, 15345049, 36377737, 21717185, 17701204, 20309578, 15824099
Traits
circadian rhythm, circadian clock regulation, photosynthetic activity, flavonoid biosynthesis, seed coat color, lateral root development, UV-B stress response, salt tolerance