CHS — Daucus carota subsp. sativus

Summary

DCAR_018992 (CHS) on carrot chromosome 5 encodes a protein with chalcone/stilbene synthase and type III polyketide synthase domains. The enzyme exhibits naringenin-chalcone synthase, chalcone isomerase, flavanone 4-reductase, flavonol synthase, and tetraketide alpha-pyrone synthase activities. In carrot, CHS is associated with chalcone, polyketide, flavonoid, anthocyanin, and flavonol biosynthesis, pollen wall assembly, auxin polar transport, responses to UV, UV-B, gravity, jasmonic acid, and heat acclimation, and regulation of phenylpropanoid and anthocyanin metabolism. It localizes to the cytosol, nucleus, endoplasmic reticulum, and tonoplast. The gene is linked to traits including anthocyanin content, root phototropism, flowering time, photosynthetic and respiration rates, stomatal opening, and responses to abiotic stress, oxidative stress, salt, and UV light. Studies of related genes in other species connect the family to pollen exine development, male fertility, seed pigmentation, and disease resistance.

Annotations

Chromosome
5
Related genes
CHS, SUM3, LAP5, DFR, SUM1, KMD3, FLS, SCE1
GO terms
Chalcone Isomerase Activity, translation elongation, Acyltransferase Activity, Transferring Groups Other Than Amino-acyl Groups, regulation of phenylpropanoid metabolism, Pollen Exine Formation, Flavonol Synthase Activity, flavonoid anabolism, Naringenin-chalcone Synthase Activity
Publications
29282604, 27129483, 15345049, 36377737, 21717185, 17701204, 20309578, 15824099
Traits
circadian rhythm, circadian clock regulation, photosynthetic activity, flavonoid biosynthesis, seed coat color, lateral root development, UV-B stress response, salt tolerance