AXE1 — Brassica oleracea var. botrytis
Summary
BoAXE1, located on chromosome 9 of cauliflower (Brassica oleracea var. botrytis), encodes a histone deacetylase with NAD-independent activity, also possessing histone demethylase, deacetylase, and transcription corepressor activities, and binding histones, chromatin, and ATP. It is associated with diverse biological processes including melatonin metabolism, regulation of ascorbate biosynthesis, jasmonic acid/ethylene-dependent systemic resistance, leaf formation, and epigenetic gene silencing. The gene is linked to numerous traits such as flower abscission, fruit ripening, male and female sterility, photoperiod-sensitive flowering time, sulfur and potassium sensitivity, aluminum response, and whole plant size. It localizes to the HDAC complex, PRC2 complex, nucleolus, and chloroplast envelope. Studies of related genes in other species link the family to abscisic acid response, systemic acquired resistance, seed viability, and defense against necrotrophic pathogens.
Annotations
- Chromosome
- 9
- Related genes
- AXE1, HIS4, TPL, JAZ1, DDM2, MSI5, EIL1, EIN3
- GO terms
- Histone Binding, DNA binding transcription factor activity, embryo shoot apical meristem specification, PRC2 complex, Histone Demethylase Activity, SCF-dependent proteasomal ubiquitin-dependent protein breakdown, Histone Deacetylase Activity, histone deacetylase activity, NAD-independent
- Publications
- 37552957, 20226671, 20100339, 21963667, 22476455, 29619039, 30225301, 32785253
- Traits
- lateral root branching angle, jasmonate response, herbivore defense, defense response, resistance to Botrytis cinerea, lignin biosynthesis, drought tolerance, aluminum stress tolerance