IDS4 — Brassica oleracea var. botrytis

Summary

BoIDS4, located on chromosome 4 of cauliflower (Brassica oleracea var. botrytis), encodes a prenyl diphosphate synthase with geranyltranstransferase, farnesyltranstransferase, and dimethylallyltransferase activities, functioning as an all-trans-nonaprenyl-diphosphate synthase. This gene is associated with the biosynthesis of geranylgeranyl diphosphate, farnesyl diphosphate, and geranyl diphosphate, as well as isoprenoid, terpenoid, carotenoid, plastoquinone, and ubiquinone anabolism. It has been linked to responses to herbivores, insects, jasmonic acid, and salicylate, and to photosynthetic rate. The encoded protein localizes to the plastid, chloroplast stroma and thylakoid membrane, endoplasmic reticulum, and mitochondria. Studies of related genes in other species connect the family to leaf shape, meristem identity, and photochemical quenching.

Annotations

Chromosome
4
Related genes
IDS4
GO terms
metal binding, Plastid, Response To Insect, farnesyl diphosphate anabolism, GO:0009507, geranyltranstransferase activity, ubiquinone anabolism, geranylgeranyl diphosphate anabolism
Publications
17028338, 18433503, PMID:26505977, PMID:20421194, PMID:23729351, PMID:10759500, PMID:17873098, PMID:9288918
Traits
geranylgeranyl pyrophosphate biosynthesis, geranylgeranyl pyrophosphate synthesis, endoplasmic reticulum localization, photochemical quenching, leaf shape, meristem identity, photosynthetic rate