CYP — Sorghum bicolor

Summary

SORBI_3010G257700, also known as SbSQN, encodes a cyclophilin-type peptidyl-prolyl cis-trans isomerase (PPIase; EC 5.2.1.8) with a cyclophilin-type PPIase domain. The gene is associated with diverse molecular functions including GTP:GDP antiporter activity, U5 and U2 snRNA binding, cyclosporin A binding, histone and chromatin binding, calcium ion binding, and ATP hydrolase activity. It is linked to biological processes such as regulation of ARF protein signal transduction, alternative mRNA splicing, basipetal auxin transport, embryonic pattern specification, and activation of secondary metabolite biosynthesis. Associations with traits include variegated leaf, bacterial disease response, temperature stress response, starch grain synthesis, sucrose content, phototropism, root hair length, chloroplast development, jasmonic acid content, arsenic concentration, cold tolerance, and oxidative stress response. The gene is also connected to phenotypes including root development, heat stress tolerance, auxin transport, and lateral root initiation.

Annotations

Chromosome
10
Related genes
SQN, CYP, CAM7, ROC3, CYP5, CAM1, PCKR1, BRR2
GO terms
activation of secondary metabolite biosynthesis, Translation, stress granule, Leaf Development, MRNA Processing, vesicle transport, downregulation of seed germination, U2 SnRNA Binding
Publications
28534607, 10716449, 24453227, 33264621, 36166438, 17028149, 32487565, 33822992
Traits
disease resistance, cell polarity, heat stress response, pre-mRNA splicing, heat stress tolerance, stomatal closure, seed germination, resistance to Botrytis cinerea