PTB — Solanum tuberosum

Summary

PGSC0003DMG400001427, symbol PTB and preferred name PTB7, is a potato gene on chromosome 2 that encodes an RNA-binding protein containing multiple RRM (RNA recognition motif) domains. The gene product is annotated with RNA binding and mRNA binding molecular functions, and is associated with regulation of RNA splicing, alternative mRNA splicing, translation, and mRNA processing. PTB1 has been directly linked to tuberization, tuber development, and tuber productivity in potato, and is also associated with tuber morphology and subterranean shoot axis tuber size. The protein localizes to the nucleus, cytoplasm, and P-bodies, and is connected to responses to sucrose, flowering, seed germination, and male gametophyte viability. Studies of related genes in other species link the family to pollen germination and alternative splicing.

Annotations

Chromosome
2
Related genes
PTB, PTB1, PTB2
GO terms
Swimming, NO storage, Regulation Of RNA Splicing, Seed Germination, Regulation Of Alternative MRNA Splicing, Via Spliceosome, RNA metabolism, Regulation Of Translation, Pollen Germination
Publications
28301688, 24631541, 20798276, PMID:20735772, PMID:32344669, 27432253, 16632598, PMID:27729395
Traits
Male Gametophyte Lethal, Reduced Pollen Germination, pollen germination, flowering, seed germination, alternative splicing, tuber development, tuber yield, tuberization