HMS — Nicotiana attenuata
Summary
A4A49_07270 (HMS) in Nicotiana attenuata on chromosome 10 encodes a pectinesterase (EC 3.1.1.11) with both pectinesterase and pectinesterase inhibitor domains, and also exhibits mRNA and protein binding activities. The gene is associated with pectin breakdown, cell wall modification, demethylation, and carbohydrate metabolism, as well as defence responses to bacteria, fungi, and nematodes. It is linked to root hair cell development, regulation of unidimensional cell growth, callus formation, fruit ripening, and downregulation of seed germination. Localisation evidence places the product in the apoplast, plant-type cell wall, stress granules, and cytosol. Associations with agronomic traits include photosynthetic rate, chlorophyll content, germination rate, root length and mass density, turgor pressure, and flower development. Related genes in other species are linked to cell wall development, susceptibility to necrotrophic pathogens, and adventitious root formation.
Annotations
- Chromosome
- 10
- Related genes
- PECS-2.1, PME2.2, PECS-1.1, PME2.1, PMEU1, HMS, PME3, MPE3
- GO terms
- GO:0005575, homeostasis, downregulation of seed germination, Demethylation, Pectinesterase Inhibitor Activity, Root Hair Cell Development, Exocytosis, Nucleocytoplasmic Transport
- Publications
- 37610247, 17172353, 16951057, 18539778, 28330559, 12566592, 15194820, 20736450
- Traits
- hypocotyl elongation, pectin methylesterification, susceptibility to parasitic plant infection, pectin methylesterase activity, flower development, root development, other miscellaneous trait, Limited Seed Mucilage Extrusion When Exposed to Water