AMY1 — Hordeum vulgare subsp. vulgare

Summary

HORVU.MOREX.R3.5HG0486500 (HvAMY1) on barley chromosome 5H encodes an alpha-amylase, a glycoside hydrolase family 13 enzyme (EC 3.2.1.1). The gene is associated with seed germination, endosperm development, embryo development ending in seed dormancy, and responses to gibberellin and abscisic acid. It has been linked to grain filling period, reproductive period, seed size, flowering time, and abscisic acid sensitivity. Associations include grain chalkiness, starch degradation, starch granule biosynthesis and initiation, osmotic stress tolerance, stomatal opening, heat stress response, defense gene expression, basal immunity, viral resistance, and protein stability. The protein localises to the apoplast, chloroplast stroma, cytosol, nucleus, and extracellular space. Studies of related genes in other species connect the family to transitory starch breakdown and osmotic stress response, and to submergence and drought stress responses, seed starch content, and alpha-amylase activity.

Annotations

Chromosome
5H
Related genes
AMY1, AMY1.1, SUM3, AMY1.3, SCE1, AMYC2, AMY2, AMY1.2
GO terms
structural organization, Response To Gibberellin, SUMO Binding, Embryo Development Ending In Seed Dormancy, Cytosol, Alpha-amylase Activity, protein tag, Kinase Binding
Publications
27129483, 15749471, 23909862, 20074036, 22330895, 17764576, 23393426, 16367961
Traits
starch degradation, Increased Starch Content After Cold Shock, Alpha-Amylase Deficient, aLRLpMRL125, rFitness mlp, abscisic acid response, starch breakdown, transitory starch breakdown