SC35 — Brachypodium distachyon

Summary

BdSC35 (BRADI_3G38797V3) on chromosome 3 of Brachypodium distachyon encodes a protein containing RNA-binding and RRM domains, with annotated cis-trans proline isomerase activity and RNA, mRNA, and protein binding functions. The gene is associated with spliceosomal complex assembly, regulation of alternative mRNA splicing, and mRNA processing. It localises to the nucleus, nuclear speck, nucleolus, cytosol, and plasmalemma. BdSC35 has been connected to flowering time, leaf morphology, root length, oxidative stress response, salt tolerance, ABA sensitivity, seed germination, cell expansion, and cell polarization. Related genes in other species link the family to salt stress tolerance and seed germination under stress, as well as cell expansion and polarization.

Annotations

Chromosome
3
Related genes
SC35, T1O24.11, RSZ33, SCL30, SR33, CYP59, SCL30A
GO terms
RNA Splicing, MRNA Processing, Regulation Of Alternative MRNA Splicing, Via Spliceosome, Nuclear Speck, MRNA Binding, Cytosol, Spliceosomal Complex Assembly, plasmalemma
Publications
16626458, 16367961, PMID:32989160, PMID:21166475, 24832081, PMID:25293756, 22589469, PMID:32344669
Traits
ABA sensitivity, seed germination, salt stress tolerance, seed germination under stress, other miscellaneous trait, protist disease resistance, Impaired Vacuolar Transport, Reduced Seed Coat Mucilage, mRNA processing