AXE1 — Arabidopsis thaliana

Summary

AT5G63110 (AXE1/HDA6) on chromosome 5 of Arabidopsis thaliana encodes a histone deacetylase 6, a member of the HDAC_I/II family with NAD-independent histone deacetylase activity, histone demethylase activity, transcription corepressor activity, and chromatin binding. It is associated with drought stress tolerance, ABA sensitivity, promoter silencing, and mRNA polyadenylation. The gene is linked to transposable element silencing, RNAi-like chromatin silencing, negative regulation of seed maturation, floral organ abscission, and fruit abscission. It localizes to the PRC2 complex, Sin3-type complex, HDAC complex, and nucleolus. Associations include grain size, floral organ length, flower abscission zone morphology, plant female sterility, branch angle, potassium content and sensitivity, leaf necrosis, hybrid incompatibility, and brassinosteroid content. Studies of related genes in other species link the family to meiotic recombination, disease tolerance, and soluble solid content.

Annotations

Chromosome
5
Related genes
HD1, SCL1, LUG, HIS4, HDA17, HDA9, TPL, AT3G44690
GO terms
homeostasis, Hypersensitivity, X chromosome inactivation, Memory, NO storage, Circadian Rhythm, Translation, Leaf Development
Publications
40153710, 37552957, 20387035, 20226671, 21963667, 22476455, 29619039, 30225301
Traits
female germline specification, lateral root branching angle, jasmonate response, herbivore defense, defense response, resistance to Botrytis cinerea, stomatal closure, lignin biosynthesis