PAT — Solanum tuberosum
Summary
PGSC0003DMG400004686 (PAT, also known as StES31X, StES31Y, StES31Z, UBI3, RPS27AB, RPS27AA, StUBI3, UBQ6, UBQ5, StUBI6, ES31Z, StRPS27AA) on potato chromosome 12 encodes a ubiquitin extension protein with ribosomal eS31 and ubiquitin-like domains. It is associated with structural constituent of the ribosome, histone acetyltransferase activity, ubiquitin-protein transferase activity, and mRNA binding. The gene is associated with translation, ribosome biogenesis, protein ubiquitination, and modification-dependent proteolysis. It is linked to wound response, dedifferentiation, shoot regeneration, and responses to abscisic acid, thermal stimulus, salinity, and defense. Associations include carotenoid anabolism, chloroplast development, photosynthetic rate, respiration rate, and stress tolerance traits such as high and low temperature stress response. The protein localizes to the cytosolic small ribosomal subunit, ribosome, cytosol, plastid, and plasmodesmata. Studies of related genes in other species link the family to heat and temperature stress tolerance.
Annotations
- Chromosome
- 12
- Related genes
- PAT, eS31z, UBI3, UBI6, UBQ5, IDM1, CHIP
- GO terms
- Regeneration, Dedifferentiation, Plasmodesma, salinity response, Acyltransferase Activity, Transferring Groups Other Than Amino-acyl Groups, Cytosolic Small Ribosomal Subunit, carotenoid anabolism, RdDM
- Publications
- 23448691, 18989364, 11590065, 22195043, 35000252, 15310832, 22765383, 15787614
- Traits
- other miscellaneous trait, Increased Salt Stress Response, Decreased Oxidative Stress Response, clim-bio9, temperature stress tolerance, heat stress tolerance, cold stress tolerance, abscisic acid sensitivity, low temperature response