NIR — Solanum lycopersicum

Summary

SOLYC01G108630.3, the tomato NIR (NiR1) gene on chromosome 1, encodes a ferredoxin-nitrite reductase with NO-forming nitrite reductase activity, sulfite reductase (ferredoxin) activity, and binding capabilities for 4Fe-4S clusters and heme. The gene is associated with nitrate metabolism, nitrogen utilization, pigment accumulation, the xanthophyll cycle, and response to boron. It is linked to leaf nitrogen content, nitrate content and uptake, plant dry weight, soluble protein and amino acid content, net photosynthetic rate, quantum yield, photochemical quenching, stomatal resistance, plant height, root number and length, drought tolerance, and disease tolerance. The gene is also associated with chloroplast nucleoid and stroma localization, chaperone-mediated autophagy, and plastid DNA packaging. Related genes in other species are linked to nitrite reduction and acid rain resistance.

Annotations

Chromosome
1
Related genes
NIR
GO terms
Chaperone-mediated Autophagy, homeostasis, syngamy, L-arabinose breakdown, D-galacturonate anabolism, Chlorophyll Fluorescence, Learning, UDP-D-galacturonate anabolism
Publications
37770644, 27707774, 38003624, 20444219, 24270626, 21182762, 21584187, 37047528
Traits
nitrate-responsive gene regulation, nitrite reduction, nitrate-responsive gene expression, nitrate response, chlorophyll content, leaf protein content, acid rain resistance, nitrogen deficiency response