PNH — Solanum lycopersicum

Summary

SlPNH (SOLYC01G010970.3) on tomato chromosome 1 encodes a protein containing Piwi, PAZ, and RNaseH-like domains, with annotated siRNA binding, RNA endonuclease activity, and histone ubiquitin ligase activity. In tomato, the gene is associated with fruit yield and axillary bud formation. It is linked to leaf polarity, leaf morphology, auxin signalling, TAS3 tasiRNA biogenesis, juvenile-to-adult transition, and virus resistance. Broader associations include style length, lycopene content, lignin biosynthesis, photosynthetic ability, root phototropism, meristem development, seed dormancy, and responses to UV light. Studies of related genes in other species connect the family to histone ubiquitination, leaf colour, flowering time, seed dormancy, and fungal susceptibility.

Annotations

Chromosome
1
Related genes
PNH, AtC3H6, FSD1, AGO5, DRB1, CS1, CFH1, AT1G01183
GO terms
Hypersensitivity, CRISPR-cas System, homeostasis, organogenesis, syngamy, Appendage Development, Regeneration, RNA Replication
Publications
21295131, 28900084, 31794029, 30760482, 36743500, 25320212, 23448691, 25409478
Traits
seed germination, intron splicing, plant immunity, thermotolerance, oxidative stress tolerance, redox homeostasis, miRNA processing, RNA silencing