CLA — Phaseolus vulgaris
Summary
PHAVU_006G159900, designated CLA (also known as PvDXS1, PvDXS2, PvDXPS1, PvDXPS2, PvDEF, DXS1, DXS2, DXL1, DEF, CLA1), encodes a protein with transketolase and DXP-synthase domains on chromosome 6 of French bean (Phaseolus vulgaris). The gene is associated with DXP-synthase activity, malonyl-CoA decarboxylase activity, and regulation of the mevalonate-independent isopentenyl diphosphate biosynthetic pathway. It has been linked to chloroplast development, photosynthetic rate, seed protein content, seed yield, shoot system growth, plastid development, abiotic stress response, high temperature stress response, disease tolerance, and embryo development. Localization evidence connects the product to the chloroplast envelope, nucleoid, peroxisomal lumen, tonoplast, and stress granules. Studies of related genes in other species link the family to chloroplast differentiation, isoprenoid biosynthesis via the MEP pathway, carotenoid content, photosynthesis rate, and disease resistance.
Annotations
- Chromosome
- 6
- Related genes
- CLA, DXL1, TMT1, WLIM1, JMJ24, WIP3, J20, F5N5.17
- GO terms
- Plant-type Cell Wall, Set1C, Heat Acclimation, stress granule, response to thirst, terpenoid anabolism, ubiquitin ligase binding, mitochondrial lumen
- Publications
- 32545654, 15247402, 24377444, 23054470, 25074908, 17663791, 15695462, 20080316
- Traits
- embryo development, gametophyte development, chloroplast development, other miscellaneous trait, Elevated Solo LTR and SDC Expression, No Visible Morphological Defects, Altered Gene Expression, Reduced Glucose and Fructose in Leaves, Normal Sucrose Content Under Cold Treatment