HTD1 — Oryza sativa Japonica

Summary

OsHTD1 (HTD1) on rice chromosome 12 encodes a WD40 repeat-containing protein with glutamate-rich repeats, annotated with transcription corepressor binding, histone binding, nucleic acid binding, and protein binding activities. It is associated with chromatin silencing and Cul4-RING E3 ubiquitin ligase complexes, and localises to the nucleus, cytosol, and plasma membrane. The gene is linked to leaf senescence, chlorophyll breakdown, cell death, defence response to bacteria, and regulation of DNA-templated transcription, as well as responses to heat, arsenic, and UV light. Agronomically, HTD1 is associated with tillering capacity, tiller number, plant height, grain size, seed size, seed shattering, flowering time, chlorophyll content, anthocyanin content, and disease tolerance. It has also been connected to heat stress tolerance, salt tolerance, and photomorphogenesis.

Annotations

Chromosome
12
Related genes
HTD1, HSP83, DDB1A
GO terms
Cul4-RING E3 Ubiquitin Ligase Complex, DNA Recombination, response to arsenic, DNA Repair, Nucleic Acid Binding, Cytosol, downregulation of transcription, DNA-dependent, Histone Binding
Publications
20033231, 36636802, PMID:35861422, PMID:16287169, PMID:25293756, 22589469, 18641404, PMID:28887381
Traits
flowering time, heat response, heat stress response, arsenite stress response, Mild Developmental Defects, Less Severe Than Related Mutants, photomorphogenesis, disease resistance, embryo development