HD1 — Oryza sativa Japonica

Summary

Rice HD1 (HDAC2, Os02g0215200) encodes a histone deacetylase with NAD-independent activity, also annotated with histone demethylase, transcription regulator and corepressor activities, and is a structural constituent of chromatin. It is associated with diverse biological processes including flower formation, negative regulation of seed maturation, fruit abscission, and responses to abiotic and biotic stimuli. The gene is linked to numerous agronomic traits such as grain plumpness, culm length, floral organ length, plant female sterility, branch angle, leaf elongation rate, total soluble sugar content, brassinosteroid content, and rice thrips damage response. It is also associated with drought, salinity, and salt tolerance, as well as ABA, jasmonic acid, and BR signaling. Related genes in other species link the family to female gametophyte development, flowering transition, and systemic acquired resistance.

Annotations

Chromosome
2
Related genes
HD1, SCL1, LUG, HIS4, HDA17, HDA9, TPL, AT3G44690
GO terms
homeostasis, taste, vision, protein synthesis, response to CDF, Memory, phytochrome chromophore anabolism, Circadian Rhythm
Publications
40153710, 37552957, 20387035, 20226671, 21963667, 22476455, 29619039, 30225301
Traits
female germline specification, lateral root branching angle, jasmonate response, herbivore defense, defense response, resistance to Botrytis cinerea, stomatal closure, lignin biosynthesis