CO — Lactuca sativa

Summary

LsCO (LSAT_V11C500260090) on chromosome 5 of garden lettuce encodes a CONSTANS-like protein containing a CCT domain and zinc-finger B-box domains, and is annotated with numerous molecular functions including OGTase, peptide-O-fucosyltransferase, and various histone methylase activities. The gene is associated with regulation of phytochrome signaling, photoperiodic flowering, chlorophyll breakdown, and circadian clock entrainment. It is linked to a wide range of traits including photoperiod sensitivity, inflorescence branch arrangement, seed protein content, leaf morphology, stress responses, and vegetative vigor. Related genes in other species are associated with photoperiod-dependent flowering time, stress tolerance, root architecture, and tuberization.

Annotations

Chromosome
5
Related genes
CO, SPA1, TOE1, BBX2, HRB1, DET1, BOI, COP1
GO terms
histone H3K36 methylase activity, positive regulation of protein breakdown, Regulation Of Circadian Rhythm, response to long-day, flowering, histone H3K4 methylase activity, downregulation of programmed cell death, Nuclear Body, Promoter-specific Chromatin Binding
Publications
23107921, 23144785, 26073981, 20387035, 10985392, 26358558, 27444995, 32248530
Traits
flowering time, nitrate-responsive gene expression, nitrate response, lateral root growth, pavement cell shape, pavement cell interdigitation, thermotolerance, seed germination