AXR6 (HORVU.MOREX.R3.3HG0314170) — Hordeum vulgare subsp. vulgare

Summary

HORVU.MOREX.R3.3HG0314170 (HvAXR6) on barley chromosome 3H encodes a cullin family protein with ubiquitin ligase complex scaffold activity, NEDD8 transferase activity, auxin receptor activity, and protein binding, bridging activity. In barley, the gene is associated with grain morphology. It is linked to processes including regulation of ethylene biosynthetic process, protein neddylation, response to organophosphorus, DNA damage response signal transduction, regulation of post-embryonic root development, regulation of gibberellic acid mediated signalling, and regulation of carbohydrate metabolism. The encoded protein localizes to CRL complex, CSN, and nucleotide-excision repair complex. Associations with traits such as Cercospora leaf spot response, bacterial blight disease resistance, photoperiod sensitivity trait, iron content trait, sulfur content, and fruit ripening trait have been noted. Studies of related genes in other species link the family to drought stress, lesion mimic phenotypes, and disease resistance, as well as UV-B tolerance, fertility, and seed oil content.

Annotations

Chromosome
3H
Related genes
AT3G43100, AXR6, DDB1B, SKP2A, F8K7.22, BBX2, CSA2, SK4
GO terms
GO:0005575, Circadian Rhythm, Regulation Of Cell Population Proliferation, Microtubule Cytoskeleton Organization, Leaf Development, RNA-dependent gene silencing, GA-signaling, DNA-dependent DNA replication
Publications
26073981, 22407427, 19190240, 26358558, 32248530, 20040541, 29741467, 21562334
Traits
phototropism, MET3 expression regulation, cadmium tolerance, lateral root branching angle, regeneration, thermotolerance, auxin homeostasis, seed germination