PAT — Daucus carota subsp. sativus
Summary
DCAR_024457 (PAT, DcPAT) on carrot chromosome 7 encodes a protein containing Ribosomal_eS31, Ribosomal_uL1-like, and Ribosomal_zn-bd domains, with structural constituent of ribosome, ubiquitin-protein transferase, histone acetyltransferase, and double-stranded methylated DNA binding activities. The gene is associated with translation, protein ubiquitination, modification-dependent proteolysis, RdDM, and responses to abscisic acid, salinity, and thermal stimuli. It localizes to ribosomal subunits, the Golgi, plastids, and plasmodesmata. Associations include respiration rate, photosynthetic rate, chloroplast development and function, high and low temperature stress responses, abscisic acid sensitivity, cold tolerance, DNA methylation and demethylation, and gene silencing. Related genes in other species link the family to wound response, heat stress tolerance, and temperature stress tolerance.
Annotations
- Chromosome
- 7
- Related genes
- PAT, eS31z, UBI3, UBI6, UBQ5, IDM1, CHIP
- GO terms
- Plasmodesma, salinity response, Large Ribosomal Subunit, Acyltransferase Activity, Transferring Groups Other Than Amino-acyl Groups, Cytosolic Small Ribosomal Subunit, Cytosolic Large Ribosomal Subunit, RdDM, Translation
- Publications
- 23448691, 18989364, 11590065, 22195043, 35000252, 15310832, 22765383, 15787614
- Traits
- other miscellaneous trait, Increased Salt Stress Response, Decreased Oxidative Stress Response, clim-bio9, temperature stress tolerance, heat stress tolerance, cold stress tolerance, abscisic acid sensitivity, low temperature response