AL1 — Brassica oleracea var. botrytis

Summary

BoAL1 on cauliflower chromosome 9 encodes a PHD-finger protein of the Alfin family, acting as a transcriptional co-regulator with histone-binding and DNA-binding activities. The gene is associated with maintenance of inflorescence, floral and shoot apical meristem identity, cell fate determination, root development and root hair elongation, as well as responses to salinity and phosphate starvation. It is linked to chromatin organization, epigenetic downregulation of gene expression, and viral DNA replication. Traits connected to BoAL1 include flowering time, vegetative-to-reproductive phase transition, carpel and seed development, root morphology, hypocotyl elongation, and sensitivity to abscisic acid and jasmonic acid. The protein localises to the nucleus, cytoplasm, mitochondria and PRC1 complex. Studies of related genes in other species link the family to seed germination, dormancy, thermoinhibition, phosphate homeostasis and root hair formation under phosphate deficiency.

Annotations

Chromosome
9
Related genes
AL1, AL6, K9L2.3
GO terms
viral DNA replication, Histone Binding, cellular salinity response, DNA Binding, downregulation of gene expression, epigenetic, Regulation Of DNA-templated Transcription, Zn binding, Nucleus
Publications
33589908, PMID:25533953, 30259302, 12468722, PMID:27650334, PMID:28650476, PMID:19154204, PMID:23432399
Traits
seed dormancy, seed thermoinhibition, Root Hair Elongation Defect, Phosphate-dependent, Abnormal Leaves, Enlarged SAM, Irregular Phyllotaxy, Floral Defects, Extremely Dwarfed, Arrested Inflorescence, KNOX Gene Derepression, LRDpBZ75, As75, meristem formation