DCL4 — Brassica oleracea var. botrytis

Summary

BoDCL4 (BOLND125_C09P059680.1) on cauliflower chromosome 9 encodes a Dicer-like 4 protein with RNase III, PAZ, dsRBD, and DEAD/DEAH-box helicase domains, conferring ribonuclease III, helicase, dsRNA-binding, and ATP-binding activities. The gene is associated with long and trans-acting siRNA processing, miRNA processing, post-transcriptional gene silencing, antiviral immunity, and RNA interference. It is linked to vegetative phase change, shoot apical meristem identity maintenance, adaxial/abaxial axis polarity, fruit and cotyledon development, cellulose microfibril organization, and sugar-mediated signaling. Associations also include leaf morphology, root meristem development, osmotic and low-temperature stress responses, anthocyanin accumulation, flavonoid biosynthesis, viral disease response, and resistance to Sclerotinia sclerotiorum. The protein localizes to the nucleus, cytosol, nuclear speck, and Cul4-RING E3 ubiquitin ligase complex.

Annotations

Chromosome
9
Related genes
DCL4, DRB4, MAC2
GO terms
hormone mediated signalling, RNA Processing, metal binding, Cytosol, Nucleus, ATP Binding, Cytoplasm, Nuclear Speck
Publications
19221817, 23313553, 21467580, 26355083, 22846193, 31164480, 32075560, 23847640
Traits
cadmium tolerance, plant growth and development, freezing tolerance, RNA interference, pavement cell morphogenesis, osmotic stress response, osmotic stress tolerance, root development