MBD7 — Brassica oleracea var. botrytis

Summary

BoMBD7, encoded by the gene BOLND125_C09P055870.1 on cauliflower chromosome 9, is a methyl-CpG-binding domain protein with annotated PRMT activity, histone acetyltransferase activity, and double-stranded methylated DNA binding. It localises to the nucleus, chromocenter, cytoplasm, and plasmodesma. The gene is associated with DNA methylation and demethylation, RNA-directed DNA methylation (RdDM), chromatin remodelling, and transcriptional gene silencing. It has been linked to epigenetic silencing, higher DNA methylation levels, and decreased tolerance to osmotic stress and ABA. Associations with root morphology traits have also been noted. Related genes in other species connect the family to methylated DNA binding, chromatin structure, and DNA methylation-induced gene silencing, and to hypermethylated DMRs and long roots on sucrose media.

Annotations

Chromosome
9
Related genes
MBD7, IDM3, PRMT11, IDM2, IDM1
GO terms
Histone Binding, PRMT activity, Nucleus, Cytoplasm, Demethylation, RdDM, GO:0032259, Acyltransferase Activity, Transferring Groups Other Than Amino-acyl Groups
Publications
16132859, 12678558, 11599564, 15310832, 28441590, PMID:27470001, 12383089, PMID:21533090
Traits
other miscellaneous trait, Higher DNA methylation levels, Decreased Tolerance to Osmotic Stress and ABA, Hypermethylated DMRs, Long Roots on Sucrose Media, aLRLpMRL125, DNA methylation-induced gene silencing, methylated CpG binding, clim-gs9