DIG5 — Brassica oleracea var. botrytis
Summary
BoDIG5 (BOLND125_C02P029760.1_BOLND125_V1) on cauliflower chromosome 2 encodes a protein with a tRNA_aden_deaminase domain and a cytidine deaminase-like domain. It has tRNA(Ala)-A34 deaminase activity and tRNA-adenosine deaminase activity, and is associated with tRNA wobble adenosine-to-inosine editing, tRNA processing, and lateral root formation. It localises to the nucleus. BoDIG5 is linked to lateral root development and cyclic electron flow. Related genes in other species link the family to chloroplast translation efficiency, photosynthesis, protein content, and days to flowering.
Annotations
- Chromosome
- 2
- Related genes
- DIG5
- GO terms
- Nucleus, GO:0009507, TRNA Processing, tRNA(Ala)-A34 deaminase activity, TRNA Wobble Adenosine To Inosine Editing, tRNA-adenosine deaminase activity, Lateral Root Formation
- Publications
- PMID:17317660, PMID:19602623, PMID:28133462, PMID:21139083, PMID:36142550, PMID:19460869, PMID:41052905
- Traits
- lateral root development, FT Field, chloroplast translation efficiency, photosynthesis, cyclic electron flow, days to flowering trait, protein content