SHD — Brassica napus

Summary

BnSHD (DARMORV10_A03P55100.1) on chromosome A03 encodes a heat shock protein 90 (HSP90) family member with ATP-dependent protein folding chaperone activity. The gene is associated with diverse biological processes including long-chain fatty acid metabolism, defense response to insects, ER stress response, regulation of meristem size, stem cell population maintenance, and telomere maintenance via telomerase. It has been linked to traits such as floral organ morphology, seed set percent, seed viability, pollen fertility, days to flowering, drought tolerance, nitrogen content, root development, and insect damage response. The encoded protein localizes to the ER lumen, Golgi complex, plasmodesma, and secretory vesicles. Studies of related genes in other species connect the family to thermotolerance, salt tolerance, and endoplasmic reticulum function.

Annotations

Chromosome
A03
Related genes
SHD, ATPOT1, UGT87A2, CVP1, AT4G24730, PLL19, PRXR1, TERT
GO terms
GO:0005575, 24-methylenesterol C-methyltransferase Activity, Plant-type Vacuole, Pattern Specification Process, 2',3'-cyclic-nucleotide 2'-phosphodiesterase Activity, Mn binding, Telomerase Activity, long-chain fatty acid metabolism
Publications
20226671, 11319028, 11525513, 32131509, 18571124, 20649977, 17172353, 15824099
Traits
hypocotyl elongation, skotomorphogenesis, thermomorphogenesis, heat stress response, drought tolerance, abiotic stress response, other miscellaneous trait, Serrated Petals and Sepals, Reduced Fertility