HD1 — Brachypodium distachyon
Summary
BdHD1 (BRADI_5G09190V3) on Brachypodium distachyon chromosome 5 encodes a protein with a His_deacetylse domain and is annotated with histone deacetylase activity, NAD-independent, as well as histone demethylase activity, transcription corepressor activity, and calcium-dependent protein serine/threonine kinase activity. The gene is associated with regulation of seed maturation, melatonin metabolism, fruit abscission, and responses to biotic stimuli and diterpenes. It is linked to traits including floral organ length, fruit ripening and quality, leaf elongation rate, branch angle, plant size, lignin biosynthesis, and vegetative-to-reproductive phase transition. Phenotypic associations include drought and salinity tolerance, abiotic and biotic stress responses, abscisic acid and jasmonic acid signaling, reproductive development, spikelet development, and cell division. Studies of related genes in other species connect the family to salt tolerance, brassinosteroid signaling, root and shoot development, flowering time, and grain yield traits.
Annotations
- Chromosome
- 5
- Related genes
- HD1, SCL1, LUG, HIS4, HDA17, HDA9, TPL, AT3G44690
- GO terms
- Leaf Development, PTGS, Regulation Of Timing Of Transition From Vegetative To Reproductive Phase, downregulation of seed germination, Leaf Morphogenesis, Pollen Development, regulation of ROS metabolic process, Protein Ubiquitination
- Publications
- 40153710, 37552957, 20387035, 20226671, 21963667, 22476455, 29619039, 30225301
- Traits
- female germline specification, lateral root branching angle, jasmonate response, herbivore defense, defense response, resistance to Botrytis cinerea, stomatal closure, lignin biosynthesis