PIF4 — Arabidopsis thaliana
Summary
AT2G43010, designated PIF4 (Phytochrome Interacting Factor 4) in Arabidopsis thaliana on chromosome 2, encodes a basic helix-loop-helix (bHLH) transcription factor that binds phytochrome and acts as a transcriptional activator. PIF4 is associated with the regulation of thermomorphogenesis, shade avoidance, and miRNA transcription, and has been linked to high temperature acclimation, heat stress-induced leaf senescence, and basal thermotolerance. The gene is associated with numerous traits including seedling height, leaf area index, drought recovery, and responses to light quality, UV-A, and far-red light. PIF4 localizes to chromatin, nuclear speckles, and the chloroplast nucleoid, and participates in pathways such as PIF-like-regulated transcription and phytochrome conversion. Studies of related genes in other species connect the family to fruit yield, ripening, lycopene content, cold tolerance, grain yield, and nitrogen metabolism.
Annotations
- Chromosome
- 2
- Related genes
- PIF4, PIF5, WRKY18, GAI, NF-YC5, CEO, NF-YC7, HRB1
- GO terms
- homeostasis, Thermomorphogenesis, Sleep, Hypersensitivity, syngamy, Sensory Perception, Regeneration, Memory
- Publications
- 22395476, 27512400, 25647296, 26073981, 20387035, 10985392, 26358558, 21562334
- Traits
- shade avoidance response, dark-induced leaf senescence, flowering time, female germline specification, seed germination, circadian clock regulation, light sensitivity of morning-phased gene expression, ELF3 cellular localization