CBF1 — Solanum tuberosum

Summary

PGSC0003DMG400014308, designated StCBF1 on potato chromosome 3, encodes a CRT binding factor 5 protein with DNA-binding transcription factor activity, histone acetylase activity, and transcription coactivator activity. The gene is associated with responses to freezing, drought, salinity, and heat tolerance, as well as positive regulation of leaf senescence, chlorophyll breakdown, wax and raffinose anabolism, ethylene biosynthesis, and glucose-mediated signalling. It localises to the nucleus, cytoplasm, and histone acetylase complex. StCBF1 is linked to numerous traits including tuber size, net photosynthetic rate, transpiration rate, anthocyanin content, lateral root length, leaf trichome density, and responses to water stress, nutrients, cytokinin, auxin, brassinosteroids, and biotic stress. Related genes in other species are associated with freezing, dehydration, salt, and drought tolerance, as well as photosynthetic capacity and pathogen resistance.

Annotations

Chromosome
3
Related genes
CBF1, CBF2, CBF3, CBF4, ABF2, TPR1, ABF4, BGT
GO terms
structural organization, homeostasis, raffinose anabolism, Cis-regulatory Region Sequence-specific DNA Binding, Cold Acclimation, glucosinolate metabolism, salinity response, cellular response to drought
Publications
24614501, 15356330, 33318632, 16720694, 17346263, 37626962, 25461698, 19270069
Traits
nitrate-responsive gene expression, lateral root growth, nitrate response, freezing tolerance, drought tolerance, stomatal development, ABA response, abscisic acid response