CLA — Solanum lycopersicum

Summary

SOLYC01G067890.4 (CLA, also known as DXS1, DXS2, and DEF) encodes a protein with DXP-synthase activity and transketolase domains, placing it in the 1-deoxy-D-xylulose-5-phosphate synthase family. In tomato, the gene is associated with carotenoid biosynthesis, sesquiterpene and monoterpene production, herbivore resistance, and trichome density. It is linked to numerous agronomic traits including fruit color, lycopene and carotene content, fruit weight and set, seed yield, protein content, and size, as well as leaf weight, plant height, photosynthetic rate, and responses to high temperature and drought. The encoded protein is associated with chloroplast and peroxisomal localization and with processes such as isoprenoid metabolism, phytoene anabolism, and pigment metabolism. Studies of related genes in other species connect the family to chloroplast differentiation, isoprenoid biosynthesis, and disease resistance.

Annotations

Chromosome
1
Related genes
CLA, TMT1, WLIM1, JMJ24, WIP3, J20, F5N5.17, MRF2
GO terms
Biological Regulation, Pupal Development, Metamorphosis, homeostasis, organogenesis, syngamy, Chlorophyll Fluorescence, protein synthesis
Publications
32545654, 26116608, 15247402, 24377444, 23054470, 25074908, 17663791, 15695462
Traits
embryo development, gametophyte development, chloroplast development, other miscellaneous trait, Elevated Solo LTR and SDC Expression, No Visible Morphological Defects, Altered Gene Expression, Reduced Glucose and Fructose in Leaves, Normal Sucrose Content Under Cold Treatment