CLA — Phaseolus vulgaris
Summary
PHAVU_003G099600, designated CLA (also known as PvDXPS1, PvDXS1, and DEF), encodes a protein with DXP-synthase activity and transketolase domains, placing it in the 1-deoxy-D-xylulose-5-phosphate synthase family. In French bean (Phaseolus vulgaris, chromosome 3), the gene is associated with the methylerythritol phosphate (MEP) pathway, regulation of isopentenyl diphosphate biosynthesis, and malonyl-CoA breakdown. It is linked to chloroplast development, photosynthetic rate, seed protein content, seed yield, and shoot system growth. Associations also include responses to carbon starvation, glucose, fructose, high temperature, and nematodes. The gene product localizes to chloroplast envelopes, nucleoids, peroxisomes, mitochondria, and stress granules. Studies of related genes in other species connect the family to isoprenoid biosynthesis, chloroplast differentiation, carotenoid accumulation, and disease resistance.
Annotations
- Chromosome
- 3
- Related genes
- CLA, DXL1, TMT1, WLIM1, JMJ24, WIP3, J20, F5N5.17
- GO terms
- Plant-type Cell Wall, Set1C, Heat Acclimation, stress granule, response to thirst, terpenoid anabolism, ubiquitin ligase binding, mitochondrial lumen
- Publications
- 32545654, 15247402, 24377444, 23054470, 25074908, 17663791, 15695462, 20080316
- Traits
- embryo development, gametophyte development, chloroplast development, other miscellaneous trait, Elevated Solo LTR and SDC Expression, No Visible Morphological Defects, Altered Gene Expression, Reduced Glucose and Fructose in Leaves, Normal Sucrose Content Under Cold Treatment