AFB1 — Oryza sativa Japonica

Summary

OS05G0150500 (AFB1, also known as TIR1) encodes an F-box and leucine-rich repeat-containing protein that exhibits NEDD8 transferase, ubiquitin-like protein transferase, auxin influx/efflux transmembrane transporter, and ABC-type indole transporter activities. In rice, AFB1 is associated with defense, drought and salt stress responses, phosphate homeostasis, tillering, flower development, and growth. It is linked to the regulation of defense response by callose deposition, cellular response to nitrate, establishment of planar polarity, SCF complex assembly, and indole glucosinolate breakdown. The protein localizes to the nuclear SCF complex and ubiquitin ligase complex. Studies of related genes in other species link the family to auxin sensitivity, lateral root formation, inflorescence branching, and herbicide resistance.

Annotations

Chromosome
5
Related genes
AFB1, AXR5, IAA29, AFB5, AXR3, SK4, AFB3, TIR1
GO terms
homeostasis, syngamy, protein synthesis, Feeding Behavior, Microtubule Cytoskeleton Organization, Leaf Development, Cadmium Ion Transmembrane Transporter Activity, amino acid permease activity
Publications
21640126, 25358093, 16452072, 28993788, 26714008, 20040541, 28388893, 29741467
Traits
auxin response, jasmonate response, photoperiod stress response, root growth cessation, adventitious root initiation, hypocotyl adventitious root formation, root growth, lateral root formation