AN3 — Oryza sativa Indica Group

Summary

BGIOSGA009861 (OiAN3, also known as OiGIF1) on chromosome 3 of Indica rice encodes an SS18 N-terminal domain-containing protein with multiple annotated molecular functions including fucosidase, beta-glucosidase, translation repressor, and ATP-dependent chromatin remodeler activities. This gene is associated with embryonic meristem initiation, floral whorl morphogenesis, organ boundary specification, seed development, and reproductive meristem phase change. It localizes to the nuclear lamina, SAGA complex, and SWI-SNF complex. OiAN3 is linked to numerous agronomic traits including panicle number, plant size, photoperiod sensitivity, and responses to abiotic stresses such as boron, copper, and aluminum. Related genes in other species are linked to organ size, leaf cell size, floral development, drought and salt stress responses, and immunity.

Annotations

Chromosome
3
Related genes
ARTHCP059, AN3, TRA1a, SYD, GRF2, BGLU19, F21M12.3, GRF1
GO terms
regulation of defence response to fungi, stress granule, Leaf Development, Cytoplasmic Translational Elongation, Microsporogenesis, regulation of ethene mediated signaling pathway, downregulation of cell proliferation, response to symbiotic fungi
Publications
17028149, 15215506, 15381001, 36189880, 37626962, 17172353, 15755812, 15247402
Traits
MET3 expression regulation, hypocotyl growth, root growth, leaf meristem positioning, drought tolerance, seed growth, plant development, biotic stress response