CO — Daucus carota subsp. sativus

Summary

DCAR_026289 (DcCO) on carrot chromosome 7 encodes a CONSTANS-like protein containing B-box and CCT domains, and is annotated with OGTase activity, peptide-O-fucosyltransferase activity, and red/far-red light photoreceptor activity. The gene is associated with regulation of phytochrome signaling pathway, upregulation of short-day photoperiodism and flowering, response to long-day and short-day conditions, and photoentrainment of the circadian clock. It is linked to upregulation of chlorophyll breakdown, regulation of ascorbate biosynthesis, and drought escape pathways. Associations extend to numerous agronomic traits including photoperiod sensitivity, vegetative vigor, subterranean shoot axis tuber size, seed protein content, leaf angle, iron content, and responses to water stress, nitrogen, nitrate, glyphosate, and nematodes. Related genes in other species connect it to photoperiod-dependent flowering time, heat stress tolerance, disease resistance, tuberization, and seed longevity.

Annotations

Chromosome
7
Related genes
CO, SPA1, TOE1, BBX2, HRB1, DET1, BOI, COP1
GO terms
histone H3K36 methylase activity, positive regulation of protein breakdown, Regulation Of Circadian Rhythm, response to long-day, flowering, histone H3K4 methylase activity, downregulation of programmed cell death, Nuclear Body, Promoter-specific Chromatin Binding
Publications
23107921, 23144785, 26073981, 20387035, 10985392, 26358558, 27444995, 32248530
Traits
flowering time, nitrate-responsive gene expression, nitrate response, lateral root growth, pavement cell shape, pavement cell interdigitation, thermotolerance, seed germination