CO — Daucus carota subsp. sativus
Summary
DCAR_001708 (symbol CO, also known as DcCO, FG, and multiple BBX/COL designations) on carrot chromosome 1 encodes a CONSTANS-like protein containing a CCT domain. The product is annotated with numerous molecular functions including OGTase, peptide-O-fucosyltransferase, and histone methylase activities, as well as red/far-red light photoreceptor activity. This gene is associated with regulation of the phytochrome signaling pathway, photoperiodic flowering responses (both short-day and long-day), chlorophyll breakdown, and circadian clock photoentrainment. It is linked to diverse traits including photoperiod sensitivity, vegetative vigor, leaf morphology, seed protein content, iron content, and responses to water stress, nitrogen, and glyphosate. Studies of related genes in other species link the family to flowering time, tuberization, stress tolerance, and root architecture.
Annotations
- Chromosome
- 1
- Related genes
- CO, SPA1, TOE1, BBX2, HRB1, DET1, BOI, COP1
- GO terms
- histone H3K36 methylase activity, positive regulation of protein breakdown, Regulation Of Circadian Rhythm, response to long-day, flowering, histone H3K4 methylase activity, downregulation of programmed cell death, Nuclear Body, Promoter-specific Chromatin Binding
- Publications
- 23107921, 23144785, 26073981, 20387035, 10985392, 26358558, 27444995, 32248530
- Traits
- flowering time, nitrate-responsive gene expression, nitrate response, lateral root growth, pavement cell shape, pavement cell interdigitation, thermotolerance, seed germination