CAF — Capsicum annuum

Summary

CaCAF (T459_25176) on pepper chromosome 10 encodes an endoribonuclease Dicer-like protein 1, possessing domains including Dicer dimerisation, RNase III, PAZ, dsRBD, and DEAD/DEAH box helicase. The gene is associated with ribonuclease III activity, dsRNA binding, helicase activity, and miRNA binding, and is linked to pre-miRNA and ta-siRNA processing, gene silencing by miRNA, and regulation of seed maturation and embryonic pattern specification. It has been connected to numerous agronomic traits including leaf and floral organ morphology, viral disease response, abiotic stress resistance, seed dormancy, and herbicide sensitivity. The gene is also associated with antiviral defense, systemic RNA interference, and resistance to Fusarium brachygibbosum and Sclerotinia sclerotiorum. Related genes in other species link the family to virus resistance, small RNA biogenesis, and developmental timing.

Annotations

Chromosome
10
Related genes
CAF, DCL3, DRB2, CRM2, DDL, DRB1, NOT2a, SE
GO terms
Chlorophyll Fluorescence, Ta-siRNA Processing, RNA Processing, D body, CCR4-NOT Core Complex, DNA Demethylase Activity, DNA glycosylase activity, Response To Glucose
Publications
12857820, 17164336, 19221817, 21295131, 19953107, 21378120, 23110057, 24731939
Traits
cadmium tolerance, microRNA biogenesis, cold stress tolerance, abiotic stress response, defense priming, MAMP-triggered immunity, immune response, plant growth and development