RUBY — Brassica oleracea var. botrytis
Summary
BoRUBY (BOLND125_C07P023530.1_BOLND125_V1) on cauliflower chromosome 7 encodes a protein with galactose oxidase and aldehyde oxidase activities, belonging to the glyoxal oxidase N-terminal domain and galactose oxidase/kelch beta-propeller families. The gene is associated with cell wall modification, mucilage extrusion from the seed coat, regeneration, and defence response to fungi. Its product localises to the plant-type cell wall, extracellular region, and cytoplasm. BoRUBY is linked to seed coat mucilage defects, including suppressed mucilage extrusion, abnormal seed coat structure, and detached epidermal cells. Related genes in other species connect the family to cell-to-cell adhesion, pectin composition and cross-linking, and seed coat mucilage extrusion phenotypes. The gene is also related to GLOX and linked to flower colour traits through sequence similarity.
Annotations
- Chromosome
- 7
- Related genes
- RUBY, GLOX
- GO terms
- Regeneration, Cytoplasm, defence response to fungi, Plant-type Cell Wall, extracellular, Cell Wall Modification, GO:0005615, Aldehyde Oxidase Activity
- Publications
- 15086809, PMID:23090239, PMID:20512385, PMID:39897731, PMID:34042158, PMID:41133188, PMID:41470683, PMID:37195892
- Traits
- Seed Coat Cell Detachment with Mucilage Extrusion, Suppressed Mucilage Defect, Detached Seed Coat Cells, Suppressed Seed Coat Mucilage Defect, Detached Epidermal Cells, Suppressed Mucilage Defect with Seed Coat Cell Detachment, Seed Coat Mucilage Abnormalities, Enhanced Extrusion, Suppressed Mucilage Defect, Abnormal Seed Coat Structure, Detached Seed Coat Epidermal Cells, Abnormal Seed Coat Mucilage Structure