SR1 — Brassica oleracea var. botrytis
Summary
BoSR1, encoded by gene BOLND125_C04P000770.1 on cauliflower chromosome 4, produces a protein with ubiquitin ligase activity that binds ribosomes, mRNA, transcription cis-regulatory regions, and other proteins. The protein localises to the nucleus and belongs to the ZNF598/HEL2 family, containing RING-HC, C2H2 zinc-finger, and PAH domains. BoSR1 is associated with protein ubiquitination, rescue of stalled cytosolic ribosomes, and response to flooding. It has also been linked to increased oxidative stress sensitivity. Studies of related genes in other species connect the family to enhanced submergence tolerance, though this has not been established in cauliflower.
Annotations
- Chromosome
- 4
- Related genes
- SR1, SRH1
- GO terms
- MRNA Binding, Nucleus, ubiquitin ligase activity, Protein Ubiquitination, Rescue Of Stalled Cytosolic Ribosome, Ribosome Binding, Transcription Cis-regulatory Region Binding, Response To Flooding
- Publications
- 20032078, PMID:25533953, PMID:32344669, 30169501, PMID:27729395, PMID:30873147, PMID:18650403, PMID:11983057
- Traits
- other miscellaneous trait, Enhanced Submergence Tolerance, Increased Oxidative Stress Sensitivity, clim-bio9, submergence tolerance