EFS — Brassica napus

Summary

BnEFS (EFS, SDG8) on chromosome C06 of oilseed rape encodes a protein with SET, AWS, post-SET and Znf_CW domains, annotated with histone H3K4, H3K27 and H3K36 methylase activities, and also as a histone reader and transcription regulator. It is associated with regulation of short-day photoperiodism, flowering, carotenoid metabolism, brassinosteroid response, root morphogenesis, lateral root development, and regulation of HR. The gene is linked to yield, silique morphology, anther and flower morphology, photoperiod-sensitive flowering time, seed dormancy, germination rate, shoot branching, lignin content, and responses to temperature stress, UV-B light, copper, nitrogen, and herbicides. It localises to chromatin, the Paf1 complex, and Polycomb repressive complexes.

Annotations

Chromosome
C06
Related genes
RP11-396C23.1, EFS, CO, SUM2, HNI9, ATX1, BES1, VIP4
GO terms
Nuclear Body, Regulation Of Root Development, ssRNA binding, DNA binding transcription factor activity, Cellular Response To Brassinosteroid Stimulus, Heat Acclimation, PRC2 complex, Set1C
Publications
23107921, 23144785, 20333248, 20387035, 26358558, 20226671, 18545707, 10787063
Traits
flowering time, photoperiodic flowering, flavonoid biosynthesis, resistance to Hyaloperonospora arabidopsidis, pathogen resistance, circadian rhythm, drought memory, chilling sensitivity