EFS — Brassica napus

Summary

BnEFS (EFS, SDG8) on chromosome A07 of oilseed rape encodes a protein with SET, AWS, post-SET and Znf_CW domains, possessing histone H3K4, H3K9, H3K27 and H3K36 methylase activities, histone reader and transcription regulator activity, and phosphatidylinositol-5-phosphate binding. It is associated with regulation of flowering time, photoperiod sensitivity, carotenoid metabolism, brassinosteroid response, root morphogenesis, lateral root development, quiescent center organization, secondary shoot formation, actin cytoskeleton organization, UV protection, and the hypersensitive response. The gene is linked to yield, silique morphology, anther morphology, flower morphology, stamen length, seed dormancy, germination rate, vegetative vigor, whole plant size, shoot branching, lignin content, starch grain synthesis, transpiration rate, and sensitivities to copper, nitrogen, gibberellic acid, jasmonic acid, herbicides, red light, UV-B light, and temperature stress. It localises to chromatin, Paf1, PRC2, Set1C, and HDAC complexes.

Annotations

Chromosome
A07
Related genes
RP11-396C23.1, EFS, CO, SUM2, HNI9, ATX1, BES1, VIP4
GO terms
Nuclear Body, Regulation Of Root Development, ssRNA binding, DNA binding transcription factor activity, Cellular Response To Brassinosteroid Stimulus, Heat Acclimation, PRC2 complex, Set1C
Publications
23107921, 23144785, 20333248, 20387035, 26358558, 20226671, 18545707, 10787063
Traits
flowering time, photoperiodic flowering, flavonoid biosynthesis, resistance to Hyaloperonospora arabidopsidis, pathogen resistance, circadian rhythm, drought memory, chilling sensitivity