HD1 — Brachypodium distachyon

Summary

BdHD1 (BRADI_1G37290V3) on Brachypodium distachyon chromosome 1 encodes a histone deacetylase with NAD-independent activity, also annotated with histone demethylase, transcription corepressor, and calcium-dependent protein serine/threonine kinase activities. The gene is associated with regulation of seed maturation, fruit abscission, melatonin metabolism, and responses to biotic stimuli and diterpenes. It is linked to traits including floral organ length, fruit ripening and quality, leaf elongation rate, branch angle, plant size, shoot growth angle, vegetative-to-reproductive phase transition, temperature stress response, lignin biosynthesis, and total soluble sugar content. The product localizes to HDAC and PRC2 complexes, condensed chromosomes, nucleolus, and chloroplast envelope. Studies of related genes in other species link the family to salt tolerance, brassinosteroid signaling, and plant architecture, while related genes in other species are also associated with flower development, abscisic acid response, and systemic acquired resistance.

Annotations

Chromosome
1
Related genes
HD1, SCL1, LUG, HIS4, HDA17, HDA9, TPL, AT3G44690
GO terms
Leaf Development, PTGS, Regulation Of Timing Of Transition From Vegetative To Reproductive Phase, downregulation of seed germination, Leaf Morphogenesis, Pollen Development, regulation of ROS metabolic process, Protein Ubiquitination
Publications
40153710, 37552957, 20387035, 20226671, 21963667, 22476455, 29619039, 30225301
Traits
female germline specification, lateral root branching angle, jasmonate response, herbivore defense, defense response, resistance to Botrytis cinerea, stomatal closure, lignin biosynthesis