PAT — Beta vulgaris subsp. vulgaris
Summary
BvPAT (BVRB_7G177290) on sugar beet chromosome Bvchr7_un.sca001 encodes a Nedd8-like ubiquitin family protein with ubiquitin-like modifier activating enzyme activity and protein tag function. It is associated with protein neddylation, ubiquitination, modification-dependent proteolysis, SCF complex assembly, and cellular auxin homeostasis. The gene has been linked to responses to red/far-red light, cytokinin, jasmonic acid, and ethylene, as well as regulation of circadian rhythm, flower development, leaf morphogenesis, and endosperm development. It localizes to CRL complexes, ubiquitin ligase complexes, the cytosol, and endoplasmic reticulum. Associations include biomass yield, flowering time, disease tolerance, herbicide sensitivity, lateral root length, shoot branching, and phototropism. Studies of related genes in other species connect the family to auxin resistance, root gravitropism, disease resistance, and stem elongation.
Annotations
- Chromosome
- Bvchr7_un.sca001
- Related genes
- PAT, RUB1, CUL3, RUB2, AXR1, AT1G68185, CUL3B, AXR6
- GO terms
- genetic transfer, Regulation Of Circadian Rhythm, CRL complex, Condensed Nuclear Chromosome, Response To Red Or Far Red Light, Ubiquitin-like Modifier Activating Enzyme Activity, Protein Neddylation, Leaf Morphogenesis
- Publications
- 20040541, 28388893, 29741467, 12161644, 21554755, 16275351, 29909289, 28096463
- Traits
- endophytic colonization, trichome branching, protein degradation, flowering time, lateral root formation, ubiquitin-like protein expression, hypocotyl elongation, apical dominance