PAT — Beta vulgaris subsp. vulgaris

Summary

BvPAT (BVRB_000430) on sugar beet chromosome 0010.scaffold00043 encodes a ubiquitin-like domain-containing protein with ribosomal eL40 and ubiquitin domains, and is annotated with histone methylase, deubiquitinase, ubiquitin-protein transferase, and structural ribosomal constituent activities. The gene is associated with diverse processes including genetic transfer, modification-dependent proteolysis, deubiquitination, regulation of abscisic acid and salicylic acid signaling, stomatal lineage progression, seed dormancy, endosperm development, and responses to freezing, thermal stimulus, salinity, and oomycete and bacterial pathogens. It is linked to traits such as leaf chlorophyll content, biomass yield, plant height, root mass density, seed dormancy, flowering time, pollen fertility, leaf necrosis, and disease tolerance. Localization evidence connects the product to ribosomes, endosomes, the ESCRT I complex, and chromosomes. Related genes in other species are linked to cold and heat stress tolerance, immunity, leaf senescence, and fruit development.

Annotations

Chromosome
0010.scaffold00043
Related genes
YDL140C, HAP4, PAT, CSP3, ACD6, RUB3, UBP16, SDG18
GO terms
genetic transfer, Cis-regulatory Region Sequence-specific DNA Binding, Plasmodesma, Cold Acclimation, salinity response, RNA Folding Chaperone, histone methylase activity, regulation of abscisic acid anabolism
Publications
15659850, 16571618, 20226671, 23313553, 11590065, 20032078, 25604512, 33831152
Traits
abiotic stress response, ABA signaling, drought tolerance, seed size, autophagic flux, stomatal development, cell death, chilling tolerance